PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010090273.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family GeBP
Protein Properties Length: 405aa    MW: 44352.9 Da    PI: 4.5612
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010090273.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573118.43.8e-37112211197
          DUF573   1 klfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifels 92 
                     klfqrlw++eDei lLqG++d++a++gk   + ++d+  fy+++k++++++++k+qlveK+rrLKkK+++  +k++sgke+sf+++hdq +fe+s
  XP_010090273.1 112 KLFQRLWTDEDEIELLQGFLDYTAQRGKtthHGQNDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLNKISSGKEFSFKSPHDQATFEIS 206
                     579*************************5433345************************************************************ PP

          DUF573  93 kkiWg 97 
                     +kiW 
  XP_010090273.1 207 RKIWS 211
                     ****6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045045.1E-35114211IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MASHRDDVVL PGEDLSSSSS QDEDEDDVVD DDEDDDEELE NDNDDVALPS TSSAAPNTVT  60
VALPAPPKAE PPAILAISVI ADPSSDRHRN DVVLAAQPEE KKPPATLDDS RKLFQRLWTD  120
EDEIELLQGF LDYTAQRGKT THHGQNDTAL FYDQIKSKLQ LDFNKNQLVE KLRRLKKKYR  180
NVLNKISSGK EFSFKSPHDQ ATFEISRKIW SNIGAIASVA DDNALEDDDA NPNSTANFAV  240
EVKGEDAGAF SGEKKTPPRS RKRSRLKSDP RTDDRRCFSD GPAAMKDNCN NNSGGTGNNH  300
SNGNNVQGVI EETVRSCLSP LLKELLGNAM GGPCAAATRG FGGLALNPIP LNFSVPAMNL  360
GIGEVGDERW RKQQILELEV YSKRLELVQD QIKAALDELR SRGGS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010090273.10.0hypothetical protein L484_006180
TrEMBLW9QKD40.0W9QKD4_9R
STRINGGLYMA19G43180.11e-113(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32553365
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.12e-81DNA-binding storekeeper protein-related transcriptional regulator